[Simnibs-discuss] White matter surface

[Axel Thielscher]

Hi Max,

you can load the final mesh and extract the WM surface from it, e.g. in 
python:

from simnibs import mesh_io
m = mesh_io.read_msh('ernie.msh')
m = m.crop_mesh(tags=1001)
mesh_io.write_msh(m,'ernie_wm.msh')

Best,

Axel


On 07-10-2022 12:52, Maximilian Lückel wrote:
> Hi,
>
> is there a straightforward way to also get the white matter surface 
> when running CHARM?
>
>
> Thanks,
>
> Max
>
> _______________________________________________
> Simnibs-discuss mailing list
> Simnibs-discuss at drcmr.dk
> https://mailman.drcmr.dk/mailman/listinfo/simnibs-discuss

-- 
Dr. Axel Thielscher
Professor of Neurophysics and Neuroimaging
Danish Research Center for Magnetic Resonance
Copenhagen University Hospital Hvidovre
DK-2650 Hvidovre, Denmark
www.drcmr.dk
&
Department of Health Technology
Technical University of Denmark
DK-2800 Kgs. Lyngby
http://www.healthtech.dtu.dk/
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://mailman.drcmr.dk/pipermail/simnibs-discuss/attachments/20221011/63c9a1bc/attachment.html>