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    <p>Hi Max,</p>
    <p>you can load the final mesh and extract the WM surface from it,
      e.g. in python:</p>
    <p>from simnibs import mesh_io<br>
      m = mesh_io.read_msh('ernie.msh')<br>
      m = m.crop_mesh(tags=1001)<br>
      mesh_io.write_msh(m,'ernie_wm.msh')<br>
    </p>
    <p>Best,</p>
    <p>Axel</p>
    <p><br>
    </p>
    <div class="moz-cite-prefix">On 07-10-2022 12:52, Maximilian Lückel
      wrote:<br>
    </div>
    <blockquote type="cite"
      cite="mid:1581748401.9629174.1665139955012@mail.yahoo.com">
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      <div class="ydp5e7a9835yahoo-style-wrap"
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        <div id="ydp5e7a9835yiv2293502758">Hi, 
          <div><br>
          </div>
          <div>is there a straightforward way to also get the white
            matter surface when running CHARM? </div>
          <div><br>
          </div>
          <div><br>
          </div>
          <div>Thanks, </div>
          <div><br>
          </div>
          <div>Max<br>
          </div>
        </div>
      </div>
      <br>
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      <pre class="moz-quote-pre" wrap="">_______________________________________________
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</pre>
    </blockquote>
    <pre class="moz-signature" cols="72">-- 
Dr. Axel Thielscher
Professor of Neurophysics and Neuroimaging
Danish Research Center for Magnetic Resonance
Copenhagen University Hospital Hvidovre
DK-2650 Hvidovre, Denmark
<a class="moz-txt-link-abbreviated" href="http://www.drcmr.dk">www.drcmr.dk</a>
&
Department of Health Technology
Technical University of Denmark
DK-2800 Kgs. Lyngby
<a class="moz-txt-link-freetext" href="http://www.healthtech.dtu.dk/">http://www.healthtech.dtu.dk/</a></pre>
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