[Simnibs-discuss] ROI analysis using MNI coordinates using the middle cortical surfaces

Axel Thielscher axelt at drcmr.dk
Mon Jun 13 11:53:15 CEST 2022


the fsaverage template is quite well aligned with MNI space. You can 
thus tryo to apply MNI coordinates and do the ROI analyses on the 
results mapped to fsaverage space.

Best regards,


On 09-06-2022 16:31, ZHANG, bellabingbing [Student] wrote:
> Dear Madam or Sir,
> Hope this email finds you well.
> I am doing the TMS E-fields simulation. When I  analysed the 
> simulation results, I noticed we can use the default mesh file for ROI 
> analysis using MNI coordinate or use middle cortical surfaces for ROI 
> analysis based on atlas.
> However, I want to analyse the normal and tangent comments which are 
> only stored in the middle cortical surfaces file. Can I use MNI 
> coordinate for ROI analysis in this file?
> Looking forward to your reply!
> Best Regards,
> Bella
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Dr. Axel Thielscher
Professor of Neurophysics and Neuroimaging
Danish Research Center for Magnetic Resonance
Copenhagen University Hospital Hvidovre
DK-2650 Hvidovre, Denmark
Department of Health Technology
Technical University of Denmark
DK-2800 Kgs. Lyngby
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