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<p>Hi,</p>
<p>the fsaverage template is quite well aligned with MNI space. You
can thus tryo to apply MNI coordinates and do the ROI analyses on
the results mapped to fsaverage space.<br>
</p>
<p><br>
</p>
<p>Best regards,</p>
<p>Axel</p>
<p><br>
</p>
<div class="moz-cite-prefix">On 09-06-2022 16:31, ZHANG,
bellabingbing [Student] wrote:<br>
</div>
<blockquote type="cite"
cite="mid:OS3P286MB1589456734476518BE753068CAA79@OS3P286MB1589.JPNP286.PROD.OUTLOOK.COM">
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<p class="MsoNormal"><span style="font-size:12.0pt" lang="EN-US">Dear
Madam or Sir,<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:12.0pt" lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:12.0pt" lang="EN-US">Hope
this email finds you well.<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:12.0pt" lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:12.0pt" lang="EN-US">I
am doing the TMS E-fields simulation. When I analysed the
simulation results, I noticed we can use the default mesh
file for ROI analysis using MNI coordinate or use middle
cortical surfaces for ROI analysis based on atlas.<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:12.0pt" lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:12.0pt" lang="EN-US">However,
I want to analyse the normal and tangent comments which are
only stored in the middle cortical surfaces file. Can I use
MNI coordinate for ROI analysis in this file?<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:12.0pt" lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:12.0pt" lang="EN-US">Looking
forward to your reply!<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:12.0pt" lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoNormal"><span style="font-size:12.0pt" lang="EN-US">Best
Regards,<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:12.0pt" lang="EN-US">Bella<o:p></o:p></span></p>
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<pre class="moz-quote-pre" wrap="">_______________________________________________
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<pre class="moz-signature" cols="72">--
Dr. Axel Thielscher
Professor of Neurophysics and Neuroimaging
Danish Research Center for Magnetic Resonance
Copenhagen University Hospital Hvidovre
DK-2650 Hvidovre, Denmark
<a class="moz-txt-link-abbreviated" href="http://www.drcmr.dk">www.drcmr.dk</a>
&
Department of Health Technology
Technical University of Denmark
DK-2800 Kgs. Lyngby
<a class="moz-txt-link-freetext" href="http://www.healthtech.dtu.dk/">http://www.healthtech.dtu.dk/</a></pre>
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