[Simnibs-discuss] dwi2cond error

Maximilian Lückel m.lueckel at yahoo.de
Tue Aug 9 10:03:43 CEST 2022


when running dwi2cond using SimNIBS4, I get the following error message:

echo ERROR: Input file <path-to-m2m_folder>/m2m_sub-017/labeling.nii.gz' doesn't exist. Did you run charm?

Indeed, labeling.nii.gz does not exist after running charm, for all of my subjects. Did something go wrong with charm or is this a problem of dwi2cond?
It seems to work, however, if I copy/rename the final_tissues.nii.gz file generated by charm to labeling.nii.gz.


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