[Simnibs-discuss] Help with error on tutorial

Oula oulap at drcmr.dk
Fri Aug 5 08:17:28 CEST 2022


Hi Gianrocco,

Based on the output it seems this is a recon-all error. Please see the 
recon-all log as suggested by the error message:

/For more details, see the log file 
/home/gianrocco/fs_ernie/scripts/recon-all.log/

Best,
Oula


On 8/2/22 16:13, gianrocco wrote:
> Dear Simnibs staff,
>
>  I am trying this tutorial
> https://simnibs.github.io/simnibs/build/html/documentation/command_line/mri2mesh.html#mri2mesh-docs
>
> (mri2mesh --all ernie org/ernie_T1fs.nii.gz )
>
>
> And I get the attached sterr / stout
>
> Any idea ?
>
> Thanks
>
>
>
>
>
> Kind regards,
> Gianrocco Lazzari, PhD
> Data Scientist
>
> Bottneuro AG
> Novartis Campus
> Lichtstrasse 35
> CH-4056 Basel
>
> www.bottneuro.ch <http://www.bottneuro.ch>
>
>
> _______________________________________________
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> Simnibs-discuss at drcmr.dk
> https://mailman.drcmr.dk/mailman/listinfo/simnibs-discuss
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