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<p>Hi Gianrocco,</p>
<p>Based on the output it seems this is a recon-all error. Please
see the recon-all log as suggested by the error message:</p>
<p><i>For more details, see the log file
/home/gianrocco/fs_ernie/scripts/recon-all.log</i></p>
<p>Best,<br>
Oula</p>
<p><br>
</p>
<div class="moz-cite-prefix">On 8/2/22 16:13, gianrocco wrote:<br>
</div>
<blockquote type="cite"
cite="mid:D4EE0C10-8A39-4EAA-84EB-5EC5FB180B72@bottneuro.ch">
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
Dear Simnibs staff,
<div class=""><br class="">
</div>
<div class=""> I am trying this tutorial </div>
<div class=""><a
href="https://simnibs.github.io/simnibs/build/html/documentation/command_line/mri2mesh.html#mri2mesh-docs"
class="moz-txt-link-freetext" moz-do-not-send="true">https://simnibs.github.io/simnibs/build/html/documentation/command_line/mri2mesh.html#mri2mesh-docs</a></div>
<div class=""><br class="">
</div>
<div class="">(<span style="color: rgb(62, 67, 73); font-family:
Consolas, Menlo, "DejaVu Sans Mono", "Bitstream
Vera Sans Mono", monospace; font-size: 0.9em; orphans: 2;
widows: 2; background-color: rgb(238, 238, 238);" class="">mri2mesh
--all ernie org/ernie_T1fs.nii.gz )</span></div>
<div class=""><span style="color: rgb(62, 67, 73); font-family:
Consolas, Menlo, "DejaVu Sans Mono", "Bitstream
Vera Sans Mono", monospace; font-size: 0.9em; orphans: 2;
widows: 2; background-color: rgb(238, 238, 238);" class=""><br
class="">
</span></div>
<div class=""><span style="color: rgb(62, 67, 73); font-family:
Consolas, Menlo, "DejaVu Sans Mono", "Bitstream
Vera Sans Mono", monospace; font-size: 0.9em; orphans: 2;
widows: 2; background-color: rgb(238, 238, 238);" class=""><br
class="">
</span></div>
<div class="">And I get the attached sterr / stout </div>
<div class=""><br class="">
</div>
<div class="">Any idea ? </div>
<div class=""><br class="">
</div>
<div class="">Thanks </div>
<div class=""><br class="">
</div>
<br>
<fieldset class="moz-mime-attachment-header"></fieldset>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<div class=""><br class="">
<div class="">
<meta charset="UTF-8" class="">
<div dir="auto" style="caret-color: rgb(0, 0, 0); color:
rgb(0, 0, 0); letter-spacing: normal; text-align: start;
text-indent: 0px; text-transform: none; white-space: normal;
word-spacing: 0px; -webkit-text-stroke-width: 0px;
text-decoration: none; word-wrap: break-word;
-webkit-nbsp-mode: space; line-break: after-white-space;"
class="">
<div dir="auto" style="text-align: start; text-indent: 0px;
word-wrap: break-word; -webkit-nbsp-mode: space;
line-break: after-white-space;" class="">
<div><br class="">
<br class="">
Kind regards,<br class="">
Gianrocco Lazzari, PhD<span class="Apple-tab-span" style="white-space: pre;"> </span><br
class="">
Data Scientist<br class="">
<br class="">
Bottneuro AG<br class="">
Novartis Campus<br class="">
Lichtstrasse 35<br class="">
CH-4056 Basel<br class="">
<br class="">
<a href="http://www.bottneuro.ch" class=""
moz-do-not-send="true">www.bottneuro.ch</a></div>
</div>
</div>
</div>
<br class="">
</div>
<br>
<fieldset class="moz-mime-attachment-header"></fieldset>
<pre class="moz-quote-pre" wrap="">_______________________________________________
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</blockquote>
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