[Simnibs-discuss] Fwd: Re: Trouble updating/installing SIMNIBS v3.2

Navneet Kaur nkaur at wakehealth.edu
Thu Sep 24 19:47:03 CEST 2020


It worked. Thank you!



Navneet Kaur, Ph.D.

Research Fellow

Clinical Neuromodulation Laboratory

Department of Cancer Biology

Wake Forest University School of Medicine

nkaur at wakehealth.edu<mailto:nkaur at wakehealth.edu>

From: Axel Thielscher <axelt at drcmr.dk>
Sent: Thursday, September 24, 2020 1:05 PM
To: Mccalley, Daniel <mccalled at musc.edu>
Cc: fangc <fangc at drcmr.dk>; discuss at simnibs.org; Navneet Kaur <nkaur at wakehealth.edu>
Subject: [EXTERNAL] Re: Fwd: Re: [Simnibs-discuss] Trouble updating/installing SIMNIBS v3.2


Hi Dan,



thanks for sharing the log file. It seems that downloading the additional coil files did not work due to an internet problem (some firewall blocking the connection or similar).



Please install without selecting the download of the coil files. This should work.

Afterwards, download them manually from https://github.com/simnibs/simnibs-coils [github.com]<https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_simnibs_simnibs-2Dcoils&d=DwMD-g&c=yzGiX0CSJAqkDTmENO9LmP6KfPQitNABR9M66gsTb5w&r=di5Zl9WMYsFy_3c0oRQqNB7fBhCWrq3OAUJ44ZxhYgg&m=dAaw2NmCU1Ji2D7nEXbQ2vpvh4_ml2PkC5OQTLhuj4E&s=PZ2wHiSC4L-geOUGLsoVtZqqn-kGajvZM1FOYy7xgMk&e=>

(use Code --> Download ZIP). After unzipping, move them into the "ccd-files" subfolder of the simnibs installaltion.



Best,

Axel


On 9/24/2020 6:53 PM, Mccalley, Daniel wrote:
Hi all,

Sorry for the delay! The log file is attached

I cc'd Dr. Kaur as well as she is trying to setup SIMNIBS on her PC

Best,

Dan McCalley
Medical University of South Carolina
College of Graduate Studies, Neuroscience

________________________________
From: fangc <fangc at drcmr.dk><mailto:fangc at drcmr.dk>
Sent: Tuesday, September 22, 2020 6:40 AM
To: Mccalley, Daniel <mccalled at musc.edu><mailto:mccalled at musc.edu>
Cc: Axel Thielscher <axelt at drcmr.dk><mailto:axelt at drcmr.dk>; discuss at simnibs.org<mailto:discuss at simnibs.org> <discuss at simnibs.org><mailto:discuss at simnibs.org>
Subject: Re: Fwd: Re: [Simnibs-discuss] Trouble updating/installing SIMNIBS v3.2

CAUTION: External

Hi Dan,

Could you please send us your log file? It should be in the folder that
you choose to install Simnibs, and if you choose the default settings,
you can find it here:

\Users\YourName\SimNIBS-3.2\install.log

Regards,
Fang




On 2020-09-22 09:32, Axel Thielscher wrote:
> -------- Forwarded Message --------
>
>               SUBJECT:
>               Re: [Simnibs-discuss] Trouble updating/installing SIMNIBS v3.2
>
>               DATE:
>               Mon, 21 Sep 2020 18:35:45 +0000
>
>               FROM:
>               Mccalley, Daniel <mccalled at musc.edu><mailto:mccalled at musc.edu>
>
>               TO:
>               Axel Thielscher <axelt at drcmr.dk><mailto:axelt at drcmr.dk>
>
>  Hi Axel,
>
>  The installer actually worked for my MacOS install
>
>  Here's the error message that comes up for my Windows install
>
>  Thank you again!
>
>  Best,
>
> Dan McCalley
> Medical University of South Carolina
> College of Graduate Studies, Neuroscience
>
> -------------------------
>
> FROM: Axel Thielscher <axelt at drcmr.dk><mailto:axelt at drcmr.dk>
> SENT: Monday, September 21, 2020 2:25 PM
> TO: Mccalley, Daniel <mccalled at musc.edu><mailto:mccalled at musc.edu>; discuss at simnibs.org<mailto:discuss at simnibs.org>
> <discuss at simnibs.org><mailto:discuss at simnibs.org>
> SUBJECT: Re: [Simnibs-discuss] Trouble updating/installing SIMNIBS
> v3.2
>
>  CAUTION: External
>
> Hi Dan,
>
> can you please clarify whether you had also trouble with the
> installers (if yes, please send the error message etc), or whether you
> only tried the "Advanced" version. Thank you!
>
> Best,
>
> Axel
>
> On 9/21/2020 8:15 PM, Mccalley, Daniel wrote:
>
>> Hi all,
>>
>> I'm having some issues getting the latest version of SIMNIBS set
>> up.
>>
>> After initial troubleshooting, I followed the Install Using Conda
>> (Advanced) instructions for MacOS.
>>
>> In attempting to pip install from github, I get the following
>> error:
>>
>> Any advice? I've also tried this same process on Windows with no
>> luck.
>>
>> Thank you!
>>
>> Best,
>>
>> Dan McCalley
>> Medical University of South Carolina
>> College of Graduate Studies, Neuroscience
>>
>> _______________________________________________
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>
> --
> Dr. Axel Thielscher
> Associate Professor
> Danish Research Center for Magnetic Resonance
> Copenhagen University Hospital Hvidovre
> DK-2650 Hvidovre, Denmark
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> &
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--

Dr. Axel Thielscher

Associate Professor

Danish Research Center for Magnetic Resonance

Copenhagen University Hospital Hvidovre

DK-2650 Hvidovre, Denmark

www.drcmr.dk [drcmr.dk]<https://urldefense.proofpoint.com/v2/url?u=http-3A__www.drcmr.dk&d=DwMD-g&c=yzGiX0CSJAqkDTmENO9LmP6KfPQitNABR9M66gsTb5w&r=di5Zl9WMYsFy_3c0oRQqNB7fBhCWrq3OAUJ44ZxhYgg&m=dAaw2NmCU1Ji2D7nEXbQ2vpvh4_ml2PkC5OQTLhuj4E&s=aOVfJCC3tFgB-3B0tESZNlVAY4WT_wFCFlYBSIyn6A0&e=>

&

Department of Health Technology

Technical University of Denmark

DK-2800 Kgs. Lyngby

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