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<p class="MsoNormal">Hello, <o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<pre><span style="font-size:11.0pt;font-family:"Calibri",sans-serif">I’m using SimNIBS-3.2.6 to generate head segmentation for a subject. I don’t have a T2 image for this participant. I am using mri2mesh because the scan does not include neck and shoulders. This is the error I encountered. <o:p></o:p></span></pre>
<pre><span style="font-size:11.0pt;font-family:"Calibri",sans-serif"><o:p> </o:p></span></pre>
<pre><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:black">mris_convert ./opticrad_FS.fsmesh ./opticrad_FS.stl<o:p></o:p></span></pre>
<pre><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:black"><o:p> </o:p></span></pre>
<pre><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:black">/usr/local/packages/simnibs/3.2.6/simnibs_env/lib/python3.7/site-packages/simnibs/bin/linux/meshfix subcortical_FS.stl -a 2.0 --remove-handles -q -o subcortical.off<o:p></o:p></span></pre>
<pre><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:black"><o:p> </o:p></span></pre>
<pre><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:black">ERROR- fseek /home/guilherme/simnibs_misc/meshfix/contrib/JMeshLib/src/MESH_STRUCTURE/io.cpp:1335 failed.error code 255<o:p></o:p></span></pre>
<pre><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:black">exiting mri2mesh<o:p></o:p></span></pre>
<pre><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:black"><o:p> </o:p></span></pre>
<pre><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:black">In the previous discussion (linked below) this error was resolved by using a version of FSL >7. I am running fsl version 6.0.3 so that is not the issue for me. <o:p></o:p></span></pre>
<pre><span style="font-size:11.0pt;font-family:"Calibri",sans-serif"><o:p> </o:p></span></pre>
<pre><span style="font-size:11.0pt;font-family:"Calibri",sans-serif"><a href="https://mailman.drcmr.dk/pipermail/simnibs-discuss/2021-April/000205.html">https://mailman.drcmr.dk/pipermail/simnibs-discuss/2021-April/000205.html</a><o:p></o:p></span></pre>
<pre><span style="font-size:11.0pt;font-family:"Calibri",sans-serif"><o:p> </o:p></span></pre>
<pre><span style="font-size:11.0pt;font-family:"Calibri",sans-serif">Is there a solution to this issue?<o:p></o:p></span></pre>
<pre><span style="font-size:11.0pt;font-family:"Calibri",sans-serif"><o:p> </o:p></span></pre>
<pre><span style="font-size:11.0pt;font-family:"Calibri",sans-serif">Thanks!<o:p></o:p></span></pre>
<pre><span style="font-size:11.0pt;font-family:"Calibri",sans-serif">Mags M. <o:p></o:p></span></pre>
<p class="MsoNormal"><o:p> </o:p></p>
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