From wangrong0822 at gmail.com Tue Jan 4 14:07:48 2022 From: wangrong0822 at gmail.com (Rong Wang) Date: Tue, 4 Jan 2022 21:07:48 +0800 Subject: [Simnibs-discuss] subject_atlas in simnibs Message-ID: <31FC45D7-6FD6-4BB0-A722-9387888AEB58@gmail.com> An HTML attachment was scrubbed... URL: From xc.teruel at gmail.com Thu Jan 6 19:11:56 2022 From: xc.teruel at gmail.com (xavier corominas) Date: Thu, 6 Jan 2022 19:11:56 +0100 Subject: [Simnibs-discuss] Cerebellum tDCS simulation: question. Message-ID: Dear SimNIBS developers/community, I am writing to share a question about tDCS simulations in the cerebellum. I am trying to do a tDCS simulation with an anode located in the cerebellum and transform it to 'fsaverage space'. I would like to extract from the simulation the E_norm (|E|) and the E_normal (|nE|) components from coordinates situated in the cerebellum. When launching a ROI analysis using MNI coordinates (in the cerebellum) in the generated simulation transformed to fsaverage space (using the _fsavg simulation as head_mesh), MATLAB reports an error indicating that the analyzed positions exceed array bounds, as the cerebellum cannot be visualized (and I understand that no surface is created for it). I have not found any plausible way to extract these values from the cerebellum coordinates. I would be grateful for guidance on how I can do this. Any help in this regard would be appreciated. Thank you very much for everything. Cordially Xavier Corominas. -------------- next part -------------- An HTML attachment was scrubbed... URL: From mccalled at musc.edu Thu Jan 20 22:02:11 2022 From: mccalled at musc.edu (Mccalley, Daniel) Date: Thu, 20 Jan 2022 21:02:11 +0000 Subject: [Simnibs-discuss] Future plans for H-coil models Message-ID: Hi all, Are there any plans to release H-coil/brainsway coil representations past that of the H1 model available currently? Modeling the H4 coil (FDA approved for smoking cessation) would likely be beneficial to many researchers. I am also interested in the modeling the H7 coil at various cortical targets If there are any plans in place for this already please let me know! Thank you all for the work you do! -Dan McCalley -------------- next part -------------- An HTML attachment was scrubbed... URL: From giacomo.bertazzoli at unitn.it Mon Jan 24 21:54:08 2022 From: giacomo.bertazzoli at unitn.it (Giacomo Bertazzoli) Date: Mon, 24 Jan 2022 12:54:08 -0800 Subject: [Simnibs-discuss] Get max e-field coordinates Message-ID: Dear all, Is there a way to extract the coordinate at which the e-field is maximum on the cortex? Or the set of coordinates that describes the area in which the e-field is above a certain value? I am trying to do it in matlab but I don't quite get to the solution. Regards, Giacomo -- Giacomo Bertazzoli, PhD Candidate Cognition Neurostimulation & Connectivity Lab - CIMeC University of Trento, Corso Bettini 31, 38068 Rovereto (TN) Italy Email: giacomo.bertazzoli at unitn.it https://webapps.unitn.it/du/en/Persona/PER0194098 https://www.linkedin.com/in/giacomo-bertazzoli-8737b160/ -------------- next part -------------- An HTML attachment was scrubbed... URL: From Maximilian.Lueckel at lir-mainz.de Tue Jan 25 11:29:32 2022 From: Maximilian.Lueckel at lir-mainz.de (Maximilian Lueckel) Date: Tue, 25 Jan 2022 10:29:32 +0000 Subject: [Simnibs-discuss] HCP structural sequences Message-ID: Dear SimNIBS experts, would you consider the Human Connectome Project's structural (T1w + T2w) sequences appropriate for use with SimNIBS (see attached PDF for sequence parameters)? If not, what changes to the parameters would you suggest? Best, Max Aufsichtsratsvorsitzende: Dr. Carola Zimmermann, Geschaeftsfuehrer: Prof. Dr. Klaus Lieb, Prof. Dr. Beat Lutz (wissenschaftlich), Dr. Thorsten Mundi (kaufmaennisch). HRB 48032, Amtsgericht Mainz Diese E-Mail enthaelt vertrauliche und/oder rechtlich geschuetzte Informationen. Wenn Sie nicht der richtige Adressat sind oder diese E-Mail irrtuemlich erhalten haben, informieren Sie bitte sofort den Absender und loeschen Sie diese E-Mail. Das Kopieren sowie die Weitergabe dieser E-Mail und der darin enthaltenen Informationen ist nicht gestattet. This email may contain confidential and/or privileged information. If you are not the intended recipient (or have received this email in error) please notify the sender immediately and delete this e-mail. Any unauthorized copying, disclosure or distribution of the material in this email is strictly forbidden. Unsere Hinweise zum Datenschutz finden Sie hier: https://lir-mainz.de/datenschutz -------------- next part -------------- An HTML attachment was scrubbed... URL: -------------- next part -------------- A non-text attachment was scrubbed... Name: HCP_structural.pdf Type: application/pdf Size: 55415 bytes Desc: HCP_structural.pdf URL: From axelt at drcmr.dk Tue Jan 25 12:56:23 2022 From: axelt at drcmr.dk (Axel Thielscher) Date: Tue, 25 Jan 2022 12:56:23 +0100 Subject: [Simnibs-discuss] Future plans for H-coil models In-Reply-To: References: Message-ID: <25c362e3-18bc-ea86-3444-87f7b0e69f8c@drcmr.dk> Hi Dan, we're in contact with Brainsway, but it won't go fast because the coils are partly flexible, which makes modeling quite challenging. So, unfortunately, we can't give you any date. Best regards, Axel On 1/20/2022 10:02 PM, Mccalley, Daniel wrote: > Hi all, > > Are there any plans to release H-coil/brainsway coil representations > past that of the H1 model available currently? > > Modeling the H4 coil (FDA approved for smoking cessation) would likely > be beneficial to many researchers. I am also interested in the > modeling the H7 coil at various cortical targets > > If there are any plans in place for this already please let me know! > Thank you all for the work you do! > > -Dan McCalley > > > > _______________________________________________ > Simnibs-discuss mailing list > Simnibs-discuss at drcmr.dk > https://mailman.drcmr.dk/mailman/listinfo/simnibs-discuss -- Dr. Axel Thielscher Professor of Neurophysics and Neuroimaging Danish Research Center for Magnetic Resonance Copenhagen University Hospital Hvidovre DK-2650 Hvidovre, Denmark www.drcmr.dk & Department of Health Technology Technical University of Denmark DK-2800 Kgs. Lyngby http://www.healthtech.dtu.dk/ -------------- next part -------------- An HTML attachment was scrubbed... URL: